Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp48Q9D361 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp48Q9D361 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp48Q9D361 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp48Q9D361 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Snrnp48Q9D361 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Gm5417-201ENSMUST00000079706 384 ntBASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Snrnp48Q9D361 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.96■□□□□ 0.31
Snrnp48Q9D361 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Snrnp48Q9D361 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.96■□□□□ 0.3
Snrnp48Q9D361 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Snrnp48Q9D361 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Snrnp48Q9D361 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Gm30025-201ENSMUST00000218555 728 ntBASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snrnp48Q9D361 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snrnp48Q9D361 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snrnp48Q9D361 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Snrnp48Q9D361 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Snrnp48Q9D361 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Snrnp48Q9D361 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Snrnp48Q9D361 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms