Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Dio3-201ENSMUST00000097228 1449 ntBASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssr1Q9CY50 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.45■□□□□ 0.54
Ssr1Q9CY50 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.45■□□□□ 0.54
Ssr1Q9CY50 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ssr1Q9CY50 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Gm15375-201ENSMUST00000119510 849 ntBASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.44■□□□□ 0.54
Ssr1Q9CY50 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Gm11249-201ENSMUST00000117071 859 ntBASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr1Q9CY50 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Mir6349-201ENSMUST00000184059 97 ntBASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr1Q9CY50 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr1Q9CY50 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms