Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Gm15378-201ENSMUST00000121894 207 ntBASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpusd4Q9CWX4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Gm15375-201ENSMUST00000119510 849 ntBASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpusd4Q9CWX4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Rpusd4Q9CWX4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Tgds-204ENSMUST00000228543 1594 ntBASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Rpusd4Q9CWX4 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Gm10698-201ENSMUST00000182663 604 ntBASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpusd4Q9CWX4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpusd4Q9CWX4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpusd4Q9CWX4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.37□□□□□ -0.11
Rpusd4Q9CWX4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rpusd4Q9CWX4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.37□□□□□ -0.11
Rpusd4Q9CWX4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms