Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim11Q99PQ2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim11Q99PQ2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim11Q99PQ2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Gm8520-201ENSMUST00000186517 868 ntBASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim11Q99PQ2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Mir1199-201ENSMUST00000117015 119 ntBASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Gm12085-201ENSMUST00000119263 940 ntBASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Gm9731-201ENSMUST00000209480 747 ntBASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim11Q99PQ2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Trim11Q99PQ2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim11Q99PQ2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Trim11Q99PQ2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim11Q99PQ2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.33■□□□□ 0.69
Trim11Q99PQ2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.33■□□□□ 0.68
Trim11Q99PQ2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim11Q99PQ2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Gm38027-201ENSMUST00000192315 235 ntBASIC19.32■□□□□ 0.68
Trim11Q99PQ2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim11Q99PQ2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim11Q99PQ2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.3■□□□□ 0.68
Trim11Q99PQ2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms