Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gtf2ird2Q99NI3 Gm10013-201ENSMUST00000106074 672 ntBASIC17.49■□□□□ 0.39
Gtf2ird2Q99NI3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gtf2ird2Q99NI3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gtf2ird2Q99NI3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Gtf2ird2Q99NI3 Gm7370-201ENSMUST00000219471 767 ntBASIC17.49■□□□□ 0.39
Gtf2ird2Q99NI3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gtf2ird2Q99NI3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gtf2ird2Q99NI3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Gtf2ird2Q99NI3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Gtf2ird2Q99NI3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gtf2ird2Q99NI3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Gm18101-201ENSMUST00000215769 548 ntBASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gtf2ird2Q99NI3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gtf2ird2Q99NI3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 Gm18958-201ENSMUST00000174258 762 ntBASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gtf2ird2Q99NI3 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.46■□□□□ 0.38
Gtf2ird2Q99NI3 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.46■□□□□ 0.38
Gtf2ird2Q99NI3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gtf2ird2Q99NI3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.45■□□□□ 0.38
Gtf2ird2Q99NI3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms