Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Gm24841-201ENSMUST00000158676 357 ntBASIC14.89□□□□□ -0.03
Scrt1Q99M85 Mir1668-201ENSMUST00000184114 107 ntBASIC14.89□□□□□ -0.03
Scrt1Q99M85 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.89□□□□□ -0.03
Scrt1Q99M85 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scrt1Q99M85 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.88□□□□□ -0.03
Scrt1Q99M85 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scrt1Q99M85 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.87□□□□□ -0.03
Scrt1Q99M85 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.87□□□□□ -0.03
Scrt1Q99M85 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scrt1Q99M85 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Scrt1Q99M85 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scrt1Q99M85 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scrt1Q99M85 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Scrt1Q99M85 Gm11355-201ENSMUST00000121120 306 ntBASIC14.86□□□□□ -0.03
Scrt1Q99M85 Gm11950-201ENSMUST00000121615 838 ntBASIC14.86□□□□□ -0.03
Scrt1Q99M85 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.86□□□□□ -0.03
Scrt1Q99M85 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.86□□□□□ -0.03
Scrt1Q99M85 Gm18115-201ENSMUST00000221209 621 ntBASIC14.86□□□□□ -0.03
Scrt1Q99M85 Gm10566-201ENSMUST00000086739 996 ntBASIC14.86□□□□□ -0.03
Scrt1Q99M85 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.86□□□□□ -0.03
Scrt1Q99M85 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Scrt1Q99M85 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Scrt1Q99M85 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Gm18958-201ENSMUST00000174258 762 ntBASIC14.85□□□□□ -0.03
Scrt1Q99M85 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Scrt1Q99M85 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.85□□□□□ -0.03
Scrt1Q99M85 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.85□□□□□ -0.03
Scrt1Q99M85 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scrt1Q99M85 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms