Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd2Q99JR8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd2Q99JR8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd2Q99JR8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.17■□□□□ 0.34
Smarcd2Q99JR8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smarcd2Q99JR8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.17■□□□□ 0.34
Smarcd2Q99JR8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd2Q99JR8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd2Q99JR8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcd2Q99JR8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcd2Q99JR8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Gm44450-201ENSMUST00000199528 114 ntBASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Smarcd2Q99JR8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.14■□□□□ 0.34
Smarcd2Q99JR8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Gm13884-201ENSMUST00000118103 829 ntBASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Gm29707-201ENSMUST00000196325 491 ntBASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smarcd2Q99JR8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Gm15372-201ENSMUST00000120729 834 ntBASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcd2Q99JR8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms