Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Gm7791-201ENSMUST00000219066 539 ntBASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb1Q91Y08 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb1Q91Y08 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Gm27000-201ENSMUST00000182943 842 ntBASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb1Q91Y08 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb1Q91Y08 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.64■□□□□ 0.42
Pcdhb1Q91Y08 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb1Q91Y08 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb1Q91Y08 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms