Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb18Q91Y02 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Gm28033-201ENSMUST00000184224 96 ntBASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb18Q91Y02 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb18Q91Y02 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.77■□□□□ 0.43
Pcdhb18Q91Y02 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb18Q91Y02 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Gm6623-201ENSMUST00000173570 544 ntBASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Gm18958-201ENSMUST00000174258 762 ntBASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Actl10-202ENSMUST00000226583 1501 ntBASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb18Q91Y02 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Gm18669-201ENSMUST00000216049 778 ntBASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb18Q91Y02 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb18Q91Y02 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb18Q91Y02 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb18Q91Y02 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb18Q91Y02 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb18Q91Y02 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhb18Q91Y02 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms