Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb2Q91Y00 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb2Q91Y00 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Pcdhb2Q91Y00 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb2Q91Y00 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
Pcdhb2Q91Y00 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.08■□□□□ 0.49
Pcdhb2Q91Y00 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhb2Q91Y00 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhb2Q91Y00 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhb2Q91Y00 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb2Q91Y00 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb2Q91Y00 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhb2Q91Y00 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Pcdhb2Q91Y00 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.07■□□□□ 0.48
Pcdhb2Q91Y00 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb2Q91Y00 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb2Q91Y00 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb2Q91Y00 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms