Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb5Q91XZ5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb5Q91XZ5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb5Q91XZ5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb5Q91XZ5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb5Q91XZ5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.04■□□□□ 0.8
Pcdhb5Q91XZ5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb5Q91XZ5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb5Q91XZ5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb5Q91XZ5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.02■□□□□ 0.8
Pcdhb5Q91XZ5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhb5Q91XZ5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb5Q91XZ5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb5Q91XZ5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb5Q91XZ5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhb5Q91XZ5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb5Q91XZ5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Pcdhb5Q91XZ5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb5Q91XZ5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb5Q91XZ5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb5Q91XZ5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Pcdhb5Q91XZ5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb5Q91XZ5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb5Q91XZ5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.02■□□□□ 0.79
Pcdhb5Q91XZ5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb5Q91XZ5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb5Q91XZ5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb5Q91XZ5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Gm6190-201ENSMUST00000220683 1374 ntBASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb5Q91XZ5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Gm34391-201ENSMUST00000203706 907 ntBASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdhb5Q91XZ5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb5Q91XZ5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb5Q91XZ5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb5Q91XZ5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb5Q91XZ5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdhb5Q91XZ5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb5Q91XZ5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.98■□□□□ 0.79
Pcdhb5Q91XZ5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms