Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga3Q91XY5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga3Q91XY5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga3Q91XY5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga3Q91XY5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhga3Q91XY5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Gm10698-201ENSMUST00000182663 604 ntBASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga3Q91XY5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdhga3Q91XY5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga3Q91XY5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Gm4974-201ENSMUST00000209974 875 ntBASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga3Q91XY5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms