Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Vsx1Q91V10 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vsx1Q91V10 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vsx1Q91V10 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vsx1Q91V10 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vsx1Q91V10 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vsx1Q91V10 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.8■□□□□ 0.28
Vsx1Q91V10 Gm12895-201ENSMUST00000122214 226 ntBASIC16.8■□□□□ 0.28
Vsx1Q91V10 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vsx1Q91V10 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.8■□□□□ 0.28
Vsx1Q91V10 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.8■□□□□ 0.28
Vsx1Q91V10 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Vsx1Q91V10 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vsx1Q91V10 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.8■□□□□ 0.28
Vsx1Q91V10 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vsx1Q91V10 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vsx1Q91V10 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vsx1Q91V10 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vsx1Q91V10 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vsx1Q91V10 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vsx1Q91V10 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.79■□□□□ 0.28
Vsx1Q91V10 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.79■□□□□ 0.28
Vsx1Q91V10 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.79■□□□□ 0.28
Vsx1Q91V10 Gm18206-201ENSMUST00000207027 926 ntBASIC16.79■□□□□ 0.28
Vsx1Q91V10 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vsx1Q91V10 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.79■□□□□ 0.28
Vsx1Q91V10 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Vsx1Q91V10 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vsx1Q91V10 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.78■□□□□ 0.28
Vsx1Q91V10 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.78■□□□□ 0.28
Vsx1Q91V10 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vsx1Q91V10 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vsx1Q91V10 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Vsx1Q91V10 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vsx1Q91V10 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vsx1Q91V10 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vsx1Q91V10 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Vsx1Q91V10 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.77■□□□□ 0.28
Vsx1Q91V10 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.77■□□□□ 0.28
Vsx1Q91V10 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vsx1Q91V10 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.77■□□□□ 0.27
Vsx1Q91V10 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.77■□□□□ 0.27
Vsx1Q91V10 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Gm29791-202ENSMUST00000207888 369 ntBASIC16.76■□□□□ 0.27
Vsx1Q91V10 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
Vsx1Q91V10 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vsx1Q91V10 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.75■□□□□ 0.27
Vsx1Q91V10 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vsx1Q91V10 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vsx1Q91V10 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.74■□□□□ 0.27
Vsx1Q91V10 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vsx1Q91V10 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vsx1Q91V10 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Vsx1Q91V10 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vsx1Q91V10 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vsx1Q91V10 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.74■□□□□ 0.27
Vsx1Q91V10 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms