Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh18Q8VHR0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh18Q8VHR0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdh18Q8VHR0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.39■□□□□ 0.22
Pcdh18Q8VHR0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Mir5133-201ENSMUST00000174955 77 ntBASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh18Q8VHR0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Gm2399-201ENSMUST00000104944 225 ntBASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh18Q8VHR0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh18Q8VHR0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms