Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40bQ8VHP8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40bQ8VHP8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40bQ8VHP8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40bQ8VHP8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40bQ8VHP8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40bQ8VHP8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40bQ8VHP8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40bQ8VHP8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40bQ8VHP8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40bQ8VHP8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40bQ8VHP8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40bQ8VHP8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40bQ8VHP8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.28■□□□□ 0.04
Rab40bQ8VHP8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms