Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkd2Q8VE28 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkd2Q8VE28 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkd2Q8VE28 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Nkd2Q8VE28 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkd2Q8VE28 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkd2Q8VE28 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkd2Q8VE28 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.52■□□□□ 0.08
Nkd2Q8VE28 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.52■□□□□ 0.08
Nkd2Q8VE28 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkd2Q8VE28 Gm7889-201ENSMUST00000185591 958 ntBASIC15.52■□□□□ 0.08
Nkd2Q8VE28 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkd2Q8VE28 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkd2Q8VE28 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nkd2Q8VE28 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkd2Q8VE28 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkd2Q8VE28 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Nkd2Q8VE28 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkd2Q8VE28 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.52■□□□□ 0.07
Nkd2Q8VE28 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkd2Q8VE28 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkd2Q8VE28 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Nkd2Q8VE28 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkd2Q8VE28 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Idnk-204ENSMUST00000226010 1898 ntBASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkd2Q8VE28 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nkd2Q8VE28 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Gm6659-201ENSMUST00000174752 547 ntBASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkd2Q8VE28 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Gm21362-201ENSMUST00000194272 928 ntBASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkd2Q8VE28 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms