Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Gm18032-201ENSMUST00000222541 538 ntBASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Chrna3Q8R4G9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Chrna3Q8R4G9 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chrna3Q8R4G9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Gm10013-201ENSMUST00000106074 672 ntBASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Gm22697-201ENSMUST00000175194 63 ntBASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Gm18101-201ENSMUST00000215769 548 ntBASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.69■□□□□ 0.26
Chrna3Q8R4G9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Gm18958-201ENSMUST00000174258 762 ntBASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Chrna3Q8R4G9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna3Q8R4G9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.67■□□□□ 0.26
Chrna3Q8R4G9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.67■□□□□ 0.26
Chrna3Q8R4G9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna3Q8R4G9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna3Q8R4G9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna3Q8R4G9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chrna3Q8R4G9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms