Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nudcd3Q8R1N4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nudcd3Q8R1N4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Gm11927-201ENSMUST00000118472 759 ntBASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nudcd3Q8R1N4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.02■□□□□ 0.31
Nudcd3Q8R1N4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nudcd3Q8R1N4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nudcd3Q8R1N4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nudcd3Q8R1N4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nudcd3Q8R1N4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nudcd3Q8R1N4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nudcd3Q8R1N4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nudcd3Q8R1N4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nudcd3Q8R1N4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Gm42555-201ENSMUST00000199304 1039 ntBASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Mtag2-201ENSMUST00000058665 714 ntBASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Gm5874-201ENSMUST00000096101 508 ntBASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms