Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp40Q8R1F9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp40Q8R1F9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Gm27389-201ENSMUST00000183622 195 ntBASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp40Q8R1F9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpp40Q8R1F9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rpp40Q8R1F9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpp40Q8R1F9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.21■□□□□ 0.51
Rpp40Q8R1F9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpp40Q8R1F9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rpp40Q8R1F9 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.21■□□□□ 0.51
Rpp40Q8R1F9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.21■□□□□ 0.51
Rpp40Q8R1F9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rpp40Q8R1F9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rpp40Q8R1F9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.21■□□□□ 0.5
Rpp40Q8R1F9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rpp40Q8R1F9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Gm26039-201ENSMUST00000158152 144 ntBASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Gm23634-201ENSMUST00000175071 91 ntBASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp40Q8R1F9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp40Q8R1F9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp40Q8R1F9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp40Q8R1F9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms