Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Gm2274-201ENSMUST00000184539 609 ntBASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sf3a1Q8K4Z5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a1Q8K4Z5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.78■□□□□ 0.92
Sf3a1Q8K4Z5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sf3a1Q8K4Z5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sf3a1Q8K4Z5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sf3a1Q8K4Z5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sf3a1Q8K4Z5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.78■□□□□ 0.92
Sf3a1Q8K4Z5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sf3a1Q8K4Z5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sf3a1Q8K4Z5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Sf3a1Q8K4Z5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Sf3a1Q8K4Z5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sf3a1Q8K4Z5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 Mir7071-201ENSMUST00000184847 69 ntBASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Sf3a1Q8K4Z5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sf3a1Q8K4Z5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sf3a1Q8K4Z5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sf3a1Q8K4Z5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Sf3a1Q8K4Z5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Sf3a1Q8K4Z5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Sf3a1Q8K4Z5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sf3a1Q8K4Z5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.76■□□□□ 0.91
Sf3a1Q8K4Z5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.76■□□□□ 0.91
Sf3a1Q8K4Z5 Gm7370-201ENSMUST00000219471 767 ntBASIC20.76■□□□□ 0.91
Sf3a1Q8K4Z5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sf3a1Q8K4Z5 Gm9987-201ENSMUST00000069768 567 ntBASIC20.76■□□□□ 0.91
Sf3a1Q8K4Z5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sf3a1Q8K4Z5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sf3a1Q8K4Z5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Sf3a1Q8K4Z5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sf3a1Q8K4Z5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Sf3a1Q8K4Z5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms