Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
Ddx54Q8K4L0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx54Q8K4L0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC22.26■■□□□ 1.15
Ddx54Q8K4L0 Gm29707-201ENSMUST00000196325 491 ntBASIC22.26■■□□□ 1.15
Ddx54Q8K4L0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx54Q8K4L0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx54Q8K4L0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx54Q8K4L0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx54Q8K4L0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC22.26■■□□□ 1.15
Ddx54Q8K4L0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Mir8112-201ENSMUST00000184382 131 ntBASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx54Q8K4L0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx54Q8K4L0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx54Q8K4L0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx54Q8K4L0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx54Q8K4L0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC22.24■■□□□ 1.15
Ddx54Q8K4L0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Ddx54Q8K4L0 AC090659.1-201ENSMUST00000224334 768 ntBASIC22.24■■□□□ 1.15
Ddx54Q8K4L0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC22.24■■□□□ 1.15
Ddx54Q8K4L0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Ddx54Q8K4L0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC22.24■■□□□ 1.15
Ddx54Q8K4L0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ddx54Q8K4L0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Gm25990-201ENSMUST00000102440 86 ntBASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Gm13418-201ENSMUST00000119097 944 ntBASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Gm26308-201ENSMUST00000157768 69 ntBASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Gm7230-201ENSMUST00000173026 815 ntBASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Gm44450-201ENSMUST00000199528 114 ntBASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Gm18421-201ENSMUST00000204122 625 ntBASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ddx54Q8K4L0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Gm6089-201ENSMUST00000197666 938 ntBASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Gm43935-201ENSMUST00000203569 1050 ntBASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx54Q8K4L0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx54Q8K4L0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx54Q8K4L0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC22.21■■□□□ 1.15
Ddx54Q8K4L0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC22.21■■□□□ 1.15
Ddx54Q8K4L0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx54Q8K4L0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx54Q8K4L0 Dapk1-207ENSMUST00000226059 5009 ntBASIC22.21■■□□□ 1.15
Ddx54Q8K4L0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx54Q8K4L0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx54Q8K4L0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx54Q8K4L0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.15
Ddx54Q8K4L0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Gm14140-201ENSMUST00000119999 995 ntBASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Gm9727-201ENSMUST00000161387 555 ntBASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 245.7 ms