Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shtn1Q8K2Q9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Mir8112-201ENSMUST00000184382 131 ntBASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Shtn1Q8K2Q9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shtn1Q8K2Q9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shtn1Q8K2Q9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Phf7-203ENSMUST00000226565 1971 ntBASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Gm27000-201ENSMUST00000182943 842 ntBASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Gm37935-201ENSMUST00000192012 982 ntBASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shtn1Q8K2Q9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shtn1Q8K2Q9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shtn1Q8K2Q9 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.96■□□□□ 0.79
Shtn1Q8K2Q9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shtn1Q8K2Q9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms