Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cchcr1Q8K2I2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cchcr1Q8K2I2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cchcr1Q8K2I2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cchcr1Q8K2I2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cchcr1Q8K2I2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cchcr1Q8K2I2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Cchcr1Q8K2I2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cchcr1Q8K2I2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.08■□□□□ 0.81
Cchcr1Q8K2I2 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.08■□□□□ 0.81
Cchcr1Q8K2I2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Cchcr1Q8K2I2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Cchcr1Q8K2I2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cchcr1Q8K2I2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.08■□□□□ 0.8
Cchcr1Q8K2I2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cchcr1Q8K2I2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cchcr1Q8K2I2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cchcr1Q8K2I2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cchcr1Q8K2I2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Cchcr1Q8K2I2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cchcr1Q8K2I2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cchcr1Q8K2I2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cchcr1Q8K2I2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cchcr1Q8K2I2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Cchcr1Q8K2I2 Gm20760-201ENSMUST00000179197 648 ntBASIC20.06■□□□□ 0.8
Cchcr1Q8K2I2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cchcr1Q8K2I2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cchcr1Q8K2I2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cchcr1Q8K2I2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cchcr1Q8K2I2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cchcr1Q8K2I2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cchcr1Q8K2I2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cchcr1Q8K2I2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cchcr1Q8K2I2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms