Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgcs1Q8JZK9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Gm24841-201ENSMUST00000158676 357 ntBASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.23■□□□□ 0.19
Hmgcs1Q8JZK9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgcs1Q8JZK9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Gm5643-201ENSMUST00000117081 966 ntBASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgcs1Q8JZK9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.21■□□□□ 0.18
Hmgcs1Q8JZK9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hmgcs1Q8JZK9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hmgcs1Q8JZK9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hmgcs1Q8JZK9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Haglr-201ENSMUST00000100000 2085 ntBASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgcs1Q8JZK9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcs1Q8JZK9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms