Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Syne4Q8CII8 Grk6-206ENSMUST00000224995 2971 ntBASIC19.25■□□□□ 0.67
Syne4Q8CII8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syne4Q8CII8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.25■□□□□ 0.67
Syne4Q8CII8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Syne4Q8CII8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Syne4Q8CII8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Rprl3-201ENSMUST00000157400 290 ntBASIC19.24■□□□□ 0.67
Syne4Q8CII8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Syne4Q8CII8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Gm29707-201ENSMUST00000196325 491 ntBASIC19.23■□□□□ 0.67
Syne4Q8CII8 Gm44450-201ENSMUST00000199528 114 ntBASIC19.23■□□□□ 0.67
Syne4Q8CII8 Gm6296-201ENSMUST00000222599 943 ntBASIC19.23■□□□□ 0.67
Syne4Q8CII8 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.23■□□□□ 0.67
Syne4Q8CII8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.23■□□□□ 0.67
Syne4Q8CII8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Syne4Q8CII8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Syne4Q8CII8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Syne4Q8CII8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syne4Q8CII8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syne4Q8CII8 Gm13312-201ENSMUST00000119631 718 ntBASIC19.22■□□□□ 0.67
Syne4Q8CII8 Gm7862-201ENSMUST00000121461 292 ntBASIC19.22■□□□□ 0.67
Syne4Q8CII8 Gm18421-201ENSMUST00000204122 625 ntBASIC19.22■□□□□ 0.67
Syne4Q8CII8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.22■□□□□ 0.67
Syne4Q8CII8 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.22■□□□□ 0.67
Syne4Q8CII8 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.22■□□□□ 0.67
Syne4Q8CII8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syne4Q8CII8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syne4Q8CII8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Syne4Q8CII8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Syne4Q8CII8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.22■□□□□ 0.67
Syne4Q8CII8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syne4Q8CII8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syne4Q8CII8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Syne4Q8CII8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Syne4Q8CII8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Syne4Q8CII8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Syne4Q8CII8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Syne4Q8CII8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syne4Q8CII8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.21■□□□□ 0.67
Syne4Q8CII8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.21■□□□□ 0.67
Syne4Q8CII8 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.21■□□□□ 0.67
Syne4Q8CII8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syne4Q8CII8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syne4Q8CII8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Syne4Q8CII8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Syne4Q8CII8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.21■□□□□ 0.67
Syne4Q8CII8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Syne4Q8CII8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syne4Q8CII8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Syne4Q8CII8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syne4Q8CII8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syne4Q8CII8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.2■□□□□ 0.66
Syne4Q8CII8 Gm1401-201ENSMUST00000122048 772 ntBASIC19.2■□□□□ 0.66
Syne4Q8CII8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Syne4Q8CII8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.2■□□□□ 0.66
Syne4Q8CII8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syne4Q8CII8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syne4Q8CII8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.2■□□□□ 0.66
Syne4Q8CII8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syne4Q8CII8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Syne4Q8CII8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.19■□□□□ 0.66
Syne4Q8CII8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Syne4Q8CII8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syne4Q8CII8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syne4Q8CII8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syne4Q8CII8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Syne4Q8CII8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms