Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Gm18115-201ENSMUST00000221209 621 ntBASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Depdc1aQ8CIG0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Depdc1aQ8CIG0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Depdc1aQ8CIG0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Depdc1aQ8CIG0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Depdc1aQ8CIG0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Gm44450-201ENSMUST00000199528 114 ntBASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Depdc1aQ8CIG0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1aQ8CIG0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1aQ8CIG0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1aQ8CIG0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.13■□□□□ 0.65
Depdc1aQ8CIG0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1aQ8CIG0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1aQ8CIG0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1aQ8CIG0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1aQ8CIG0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1aQ8CIG0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1aQ8CIG0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1aQ8CIG0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Depdc1aQ8CIG0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Depdc1aQ8CIG0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Depdc1aQ8CIG0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Depdc1aQ8CIG0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Depdc1aQ8CIG0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Depdc1aQ8CIG0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.12■□□□□ 0.65
Depdc1aQ8CIG0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Depdc1aQ8CIG0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Depdc1aQ8CIG0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1aQ8CIG0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1aQ8CIG0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1aQ8CIG0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.11■□□□□ 0.65
Depdc1aQ8CIG0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.11■□□□□ 0.65
Depdc1aQ8CIG0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.11■□□□□ 0.65
Depdc1aQ8CIG0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1aQ8CIG0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1aQ8CIG0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.11■□□□□ 0.65
Depdc1aQ8CIG0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Depdc1aQ8CIG0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1aQ8CIG0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms