Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox30Q8CGW4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Sox30Q8CGW4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Gm15039-201ENSMUST00000118914 875 ntBASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox30Q8CGW4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox30Q8CGW4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sox30Q8CGW4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox30Q8CGW4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox30Q8CGW4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.58■□□□□ 0.56
Sox30Q8CGW4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Sox30Q8CGW4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.58■□□□□ 0.56
Sox30Q8CGW4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Sox30Q8CGW4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox30Q8CGW4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sox30Q8CGW4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox30Q8CGW4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox30Q8CGW4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Sox30Q8CGW4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox30Q8CGW4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Gm43183-201ENSMUST00000200632 547 ntBASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox30Q8CGW4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.56■□□□□ 0.56
Sox30Q8CGW4 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Gm18666-201ENSMUST00000190039 958 ntBASIC18.56■□□□□ 0.56
Sox30Q8CGW4 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms