Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh1Q8CGV4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rdh1Q8CGV4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh1Q8CGV4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rdh1Q8CGV4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh1Q8CGV4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh1Q8CGV4 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.52■□□□□ 0.24
Rdh1Q8CGV4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.52■□□□□ 0.24
Rdh1Q8CGV4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rdh1Q8CGV4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh1Q8CGV4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh1Q8CGV4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rdh1Q8CGV4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rdh1Q8CGV4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rdh1Q8CGV4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rdh1Q8CGV4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rdh1Q8CGV4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh1Q8CGV4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh1Q8CGV4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 Mir770-201ENSMUST00000103252 94 ntBASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rdh1Q8CGV4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms