Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.06■□□□□ 0.96
Smc5Q8CG46 Gm43183-201ENSMUST00000200632 547 ntBASIC21.06■□□□□ 0.96
Smc5Q8CG46 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Gm10602-201ENSMUST00000098239 609 ntBASIC21.06■□□□□ 0.96
Smc5Q8CG46 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.06■□□□□ 0.96
Smc5Q8CG46 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC21.06■□□□□ 0.96
Smc5Q8CG46 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc5Q8CG46 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Smc5Q8CG46 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc5Q8CG46 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC21.03■□□□□ 0.96
Smc5Q8CG46 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc5Q8CG46 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.03■□□□□ 0.96
Smc5Q8CG46 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.03■□□□□ 0.96
Smc5Q8CG46 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc5Q8CG46 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Smc5Q8CG46 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc5Q8CG46 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.03■□□□□ 0.96
Smc5Q8CG46 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smc5Q8CG46 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc5Q8CG46 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc5Q8CG46 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc5Q8CG46 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc5Q8CG46 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.02■□□□□ 0.96
Smc5Q8CG46 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.02■□□□□ 0.96
Smc5Q8CG46 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.02■□□□□ 0.96
Smc5Q8CG46 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc5Q8CG46 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc5Q8CG46 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smc5Q8CG46 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Smc5Q8CG46 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smc5Q8CG46 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smc5Q8CG46 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Smc5Q8CG46 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Smc5Q8CG46 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc5Q8CG46 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc5Q8CG46 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smc5Q8CG46 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smc5Q8CG46 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smc5Q8CG46 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Smc5Q8CG46 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21■□□□□ 0.95
Smc5Q8CG46 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smc5Q8CG46 Gm27000-201ENSMUST00000182943 842 ntBASIC21■□□□□ 0.95
Smc5Q8CG46 Gm9694-201ENSMUST00000193347 1189 ntBASIC21■□□□□ 0.95
Smc5Q8CG46 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smc5Q8CG46 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC21■□□□□ 0.95
Smc5Q8CG46 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms