Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Vcpip1Q8CDG3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Gm5643-201ENSMUST00000117081 966 ntBASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Gm4974-201ENSMUST00000209974 875 ntBASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vcpip1Q8CDG3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Vcpip1Q8CDG3 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.27■□□□□ 0.52
Vcpip1Q8CDG3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vcpip1Q8CDG3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Vcpip1Q8CDG3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vcpip1Q8CDG3 Gm12382-201ENSMUST00000122005 922 ntBASIC18.27■□□□□ 0.52
Vcpip1Q8CDG3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vcpip1Q8CDG3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.27■□□□□ 0.52
Vcpip1Q8CDG3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Vcpip1Q8CDG3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vcpip1Q8CDG3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vcpip1Q8CDG3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Vcpip1Q8CDG3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Vcpip1Q8CDG3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vcpip1Q8CDG3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vcpip1Q8CDG3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vcpip1Q8CDG3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vcpip1Q8CDG3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Gm43183-201ENSMUST00000200632 547 ntBASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Vcpip1Q8CDG3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vcpip1Q8CDG3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms