Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Gm26596-201ENSMUST00000180464 2655 ntBASIC20■□□□□ 0.79
E4f1Q8CCE9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
E4f1Q8CCE9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20■□□□□ 0.79
E4f1Q8CCE9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20■□□□□ 0.79
E4f1Q8CCE9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20■□□□□ 0.79
E4f1Q8CCE9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20■□□□□ 0.79
E4f1Q8CCE9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
E4f1Q8CCE9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
E4f1Q8CCE9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Gm27741-201ENSMUST00000185060 237 ntBASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
E4f1Q8CCE9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.97■□□□□ 0.79
E4f1Q8CCE9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
E4f1Q8CCE9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
E4f1Q8CCE9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
E4f1Q8CCE9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.95■□□□□ 0.78
E4f1Q8CCE9 Gm7638-201ENSMUST00000121348 967 ntBASIC19.95■□□□□ 0.78
E4f1Q8CCE9 Gm16061-201ENSMUST00000122167 857 ntBASIC19.95■□□□□ 0.78
E4f1Q8CCE9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.95■□□□□ 0.78
E4f1Q8CCE9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
E4f1Q8CCE9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
E4f1Q8CCE9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms