Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.8■□□□□ 0.76
Vps53Q8CCB4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps53Q8CCB4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps53Q8CCB4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps53Q8CCB4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Vps53Q8CCB4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.8■□□□□ 0.76
Vps53Q8CCB4 Gm18959-201ENSMUST00000208954 655 ntBASIC19.8■□□□□ 0.76
Vps53Q8CCB4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps53Q8CCB4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps53Q8CCB4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps53Q8CCB4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Vps53Q8CCB4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps53Q8CCB4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Vps53Q8CCB4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps53Q8CCB4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps53Q8CCB4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps53Q8CCB4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps53Q8CCB4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps53Q8CCB4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.79■□□□□ 0.76
Vps53Q8CCB4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps53Q8CCB4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps53Q8CCB4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Vps53Q8CCB4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.79■□□□□ 0.76
Vps53Q8CCB4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Vps53Q8CCB4 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps53Q8CCB4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Gm13401-201ENSMUST00000117074 291 ntBASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.77■□□□□ 0.76
Vps53Q8CCB4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps53Q8CCB4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps53Q8CCB4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps53Q8CCB4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps53Q8CCB4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Vps53Q8CCB4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps53Q8CCB4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Gm23634-201ENSMUST00000175071 91 ntBASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps53Q8CCB4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps53Q8CCB4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms