Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Gm6576-201ENSMUST00000169678 883 ntBASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lysmd4Q8CC84 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd4Q8CC84 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd4Q8CC84 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd4Q8CC84 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd4Q8CC84 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd4Q8CC84 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Lysmd4Q8CC84 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd4Q8CC84 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd4Q8CC84 Gm8495-201ENSMUST00000188740 694 ntBASIC15.27■□□□□ 0.04
Lysmd4Q8CC84 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lysmd4Q8CC84 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lysmd4Q8CC84 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lysmd4Q8CC84 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lysmd4Q8CC84 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lysmd4Q8CC84 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lysmd4Q8CC84 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lysmd4Q8CC84 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lysmd4Q8CC84 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.27■□□□□ 0.03
Lysmd4Q8CC84 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lysmd4Q8CC84 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lysmd4Q8CC84 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.24■□□□□ 0.03
Lysmd4Q8CC84 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms