Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Gm5417-201ENSMUST00000079706 384 ntBASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.75■□□□□ 0.59
Trim9Q8C7M3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim9Q8C7M3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Gm13216-201ENSMUST00000117145 591 ntBASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Gm27463-201ENSMUST00000183569 57 ntBASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Gm37055-201ENSMUST00000191866 133 ntBASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim9Q8C7M3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Gm18958-201ENSMUST00000174258 762 ntBASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim9Q8C7M3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim9Q8C7M3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms