Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pabpc5Q8C7D3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpc5Q8C7D3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpc5Q8C7D3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Gm23634-201ENSMUST00000175071 91 ntBASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpc5Q8C7D3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpc5Q8C7D3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Gm7638-201ENSMUST00000121348 967 ntBASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.05■□□□□ 0.32
Pabpc5Q8C7D3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpc5Q8C7D3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pabpc5Q8C7D3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms