Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Eri3Q8C460 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Eri3Q8C460 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Eri3Q8C460 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Eri3Q8C460 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.17■□□□□ 0.18
Eri3Q8C460 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Eri3Q8C460 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.17■□□□□ 0.18
Eri3Q8C460 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Eri3Q8C460 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Eri3Q8C460 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.16■□□□□ 0.18
Eri3Q8C460 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Eri3Q8C460 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.16■□□□□ 0.18
Eri3Q8C460 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.16■□□□□ 0.18
Eri3Q8C460 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Eri3Q8C460 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.16■□□□□ 0.18
Eri3Q8C460 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.16■□□□□ 0.18
Eri3Q8C460 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Eri3Q8C460 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Eri3Q8C460 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.16■□□□□ 0.18
Eri3Q8C460 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Eri3Q8C460 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Eri3Q8C460 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.15■□□□□ 0.18
Eri3Q8C460 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.15■□□□□ 0.18
Eri3Q8C460 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.15■□□□□ 0.18
Eri3Q8C460 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.15■□□□□ 0.18
Eri3Q8C460 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Eri3Q8C460 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.15■□□□□ 0.18
Eri3Q8C460 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Eri3Q8C460 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Eri3Q8C460 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Eri3Q8C460 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.14■□□□□ 0.18
Eri3Q8C460 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Eri3Q8C460 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Eri3Q8C460 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Eri3Q8C460 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.14■□□□□ 0.17
Eri3Q8C460 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Eri3Q8C460 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms