Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.26□□□□□ -0.13
Tsen54Q8C2A2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Gm10602-201ENSMUST00000098239 609 ntBASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tsen54Q8C2A2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Mir5133-201ENSMUST00000174955 77 ntBASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Tsen54Q8C2A2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tsen54Q8C2A2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms