Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek11Q8C0Q4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Gm13474-201ENSMUST00000122466 815 ntBASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nek11Q8C0Q4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Nek11Q8C0Q4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nek11Q8C0Q4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nek11Q8C0Q4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nek11Q8C0Q4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nek11Q8C0Q4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nek11Q8C0Q4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Nek11Q8C0Q4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Gm45058-201ENSMUST00000205810 766 ntBASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nek11Q8C0Q4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Gm18959-201ENSMUST00000208954 655 ntBASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nek11Q8C0Q4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms