Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim35Q8C006 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Trim35Q8C006 Gm18666-201ENSMUST00000190039 958 ntBASIC17.62■□□□□ 0.41
Trim35Q8C006 Gm44251-201ENSMUST00000204963 442 ntBASIC17.62■□□□□ 0.41
Trim35Q8C006 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.62■□□□□ 0.41
Trim35Q8C006 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC17.62■□□□□ 0.41
Trim35Q8C006 AC165260.5-201ENSMUST00000224640 1247 ntBASIC17.62■□□□□ 0.41
Trim35Q8C006 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim35Q8C006 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim35Q8C006 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim35Q8C006 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim35Q8C006 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim35Q8C006 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim35Q8C006 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim35Q8C006 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim35Q8C006 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim35Q8C006 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Trim35Q8C006 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim35Q8C006 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trim35Q8C006 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim35Q8C006 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.61■□□□□ 0.41
Trim35Q8C006 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim35Q8C006 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim35Q8C006 Gm14905-201ENSMUST00000122351 639 ntBASIC17.61■□□□□ 0.41
Trim35Q8C006 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim35Q8C006 Gm5277-201ENSMUST00000164923 556 ntBASIC17.61■□□□□ 0.41
Trim35Q8C006 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim35Q8C006 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC17.61■□□□□ 0.41
Trim35Q8C006 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC17.61■□□□□ 0.41
Trim35Q8C006 CT025538.2-201ENSMUST00000226083 772 ntBASIC17.61■□□□□ 0.41
Trim35Q8C006 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.61■□□□□ 0.41
Trim35Q8C006 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim35Q8C006 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim35Q8C006 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim35Q8C006 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.61■□□□□ 0.41
Trim35Q8C006 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim35Q8C006 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim35Q8C006 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim35Q8C006 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim35Q8C006 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim35Q8C006 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim35Q8C006 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim35Q8C006 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.61■□□□□ 0.41
Trim35Q8C006 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim35Q8C006 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Trim35Q8C006 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim35Q8C006 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim35Q8C006 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Gm43316-201ENSMUST00000197252 1295 ntBASIC17.6■□□□□ 0.41
Trim35Q8C006 Gm34701-201ENSMUST00000204213 849 ntBASIC17.6■□□□□ 0.41
Trim35Q8C006 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
Trim35Q8C006 AC168059.2-201ENSMUST00000224473 333 ntBASIC17.6■□□□□ 0.41
Trim35Q8C006 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim35Q8C006 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim35Q8C006 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim35Q8C006 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim35Q8C006 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim35Q8C006 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim35Q8C006 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.59■□□□□ 0.41
Trim35Q8C006 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim35Q8C006 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim35Q8C006 Gm11927-201ENSMUST00000118472 759 ntBASIC17.59■□□□□ 0.41
Trim35Q8C006 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim35Q8C006 Gm9916-201ENSMUST00000192943 1228 ntBASIC17.59■□□□□ 0.41
Trim35Q8C006 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC17.59■□□□□ 0.41
Trim35Q8C006 Gm19212-201ENSMUST00000216642 862 ntBASIC17.59■□□□□ 0.41
Trim35Q8C006 Gm18387-201ENSMUST00000220333 702 ntBASIC17.59■□□□□ 0.41
Trim35Q8C006 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim35Q8C006 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trim35Q8C006 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim35Q8C006 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim35Q8C006 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim35Q8C006 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim35Q8C006 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.58■□□□□ 0.41
Trim35Q8C006 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.58■□□□□ 0.41
Trim35Q8C006 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.58■□□□□ 0.41
Trim35Q8C006 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim35Q8C006 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trim35Q8C006 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim35Q8C006 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim35Q8C006 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.58■□□□□ 0.4
Trim35Q8C006 Gm37576-201ENSMUST00000194228 372 ntBASIC17.58■□□□□ 0.4
Trim35Q8C006 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.58■□□□□ 0.4
Trim35Q8C006 AC154683.1-201ENSMUST00000228409 1284 ntBASIC17.58■□□□□ 0.4
Trim35Q8C006 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Trim35Q8C006 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms