Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trerf1Q8BXJ2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trerf1Q8BXJ2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Gm715-201ENSMUST00000117865 831 ntBASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trerf1Q8BXJ2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trerf1Q8BXJ2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Mir6982-201ENSMUST00000184354 68 ntBASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trerf1Q8BXJ2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms