Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp43Q8BUM9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp43Q8BUM9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.21■□□□□ 0.34
Usp43Q8BUM9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp43Q8BUM9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp43Q8BUM9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp43Q8BUM9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Gm18958-201ENSMUST00000174258 762 ntBASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Gm30025-201ENSMUST00000218555 728 ntBASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp43Q8BUM9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.17■□□□□ 0.34
Usp43Q8BUM9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms