Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr7Q8BU04 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.18■□□□□ 0.34
Ubr7Q8BU04 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr7Q8BU04 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr7Q8BU04 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr7Q8BU04 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr7Q8BU04 Phf7-203ENSMUST00000226565 1971 ntBASIC17.17■□□□□ 0.34
Ubr7Q8BU04 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Gm29518-201ENSMUST00000190858 372 ntBASIC17.16■□□□□ 0.34
Ubr7Q8BU04 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Gm7367-201ENSMUST00000057611 492 ntBASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr7Q8BU04 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ubr7Q8BU04 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.14■□□□□ 0.34
Ubr7Q8BU04 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Gm27741-201ENSMUST00000185060 237 ntBASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ubr7Q8BU04 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ubr7Q8BU04 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr7Q8BU04 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms