Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Gm12085-201ENSMUST00000119263 940 ntBASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Gm10517-202ENSMUST00000192970 758 ntBASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab11fip4Q8BQP8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Gm27463-201ENSMUST00000183569 57 ntBASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab11fip4Q8BQP8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab11fip4Q8BQP8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab11fip4Q8BQP8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Rab11fip4Q8BQP8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab11fip4Q8BQP8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Rab11fip4Q8BQP8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip4Q8BQP8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip4Q8BQP8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip4Q8BQP8 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.83■□□□□ 0.6
Rab11fip4Q8BQP8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip4Q8BQP8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab11fip4Q8BQP8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Rab11fip4Q8BQP8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab11fip4Q8BQP8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab11fip4Q8BQP8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab11fip4Q8BQP8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms