Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Gm13559-201ENSMUST00000120476 863 ntBASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.28■□□□□ 0.36
Sfr1Q8BP27 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sfr1Q8BP27 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sfr1Q8BP27 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sfr1Q8BP27 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sfr1Q8BP27 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Sfr1Q8BP27 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Sfr1Q8BP27 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sfr1Q8BP27 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sfr1Q8BP27 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sfr1Q8BP27 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sfr1Q8BP27 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sfr1Q8BP27 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Gm6433-201ENSMUST00000118634 875 ntBASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sfr1Q8BP27 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sfr1Q8BP27 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms