Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf18Q8BM39 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Prpf18Q8BM39 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Prpf18Q8BM39 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Prpf18Q8BM39 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf18Q8BM39 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf18Q8BM39 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Mir5133-201ENSMUST00000174955 77 ntBASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf18Q8BM39 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf18Q8BM39 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms