Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.43■□□□□ 0.38
Chmp2bQ8BJF9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp2bQ8BJF9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp2bQ8BJF9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp2bQ8BJF9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp2bQ8BJF9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Gm13216-201ENSMUST00000117145 591 ntBASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Gm10602-201ENSMUST00000098239 609 ntBASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp2bQ8BJF9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2bQ8BJF9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2bQ8BJF9 Dancr-204ENSMUST00000132389 2347 ntBASIC17.38■□□□□ 0.37
Chmp2bQ8BJF9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2bQ8BJF9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2bQ8BJF9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2bQ8BJF9 Gm27275-201ENSMUST00000184318 272 ntBASIC17.38■□□□□ 0.37
Chmp2bQ8BJF9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp2bQ8BJF9 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.38■□□□□ 0.37
Chmp2bQ8BJF9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chmp2bQ8BJF9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Chmp2bQ8BJF9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms