Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm15378-201ENSMUST00000121894 207 ntBASIC17.74■□□□□ 0.43
Ccdc40Q8BI79 Gm10653-202ENSMUST00000139570 835 ntBASIC17.74■□□□□ 0.43
Ccdc40Q8BI79 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.74■□□□□ 0.43
Ccdc40Q8BI79 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc40Q8BI79 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.74■□□□□ 0.43
Ccdc40Q8BI79 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc40Q8BI79 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc40Q8BI79 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc40Q8BI79 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc40Q8BI79 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc40Q8BI79 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc40Q8BI79 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc40Q8BI79 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Gm43183-201ENSMUST00000200632 547 ntBASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Gm4974-201ENSMUST00000209974 875 ntBASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc40Q8BI79 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc40Q8BI79 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc40Q8BI79 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc40Q8BI79 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms