Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SynbQ8BI41 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynbQ8BI41 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SynbQ8BI41 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SynbQ8BI41 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.22■□□□□ 0.19
SynbQ8BI41 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SynbQ8BI41 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.22■□□□□ 0.19
SynbQ8BI41 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynbQ8BI41 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynbQ8BI41 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SynbQ8BI41 Gm9103-201ENSMUST00000119371 405 ntBASIC16.22■□□□□ 0.19
SynbQ8BI41 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.22■□□□□ 0.19
SynbQ8BI41 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.22■□□□□ 0.19
SynbQ8BI41 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynbQ8BI41 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynbQ8BI41 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SynbQ8BI41 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynbQ8BI41 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynbQ8BI41 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SynbQ8BI41 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynbQ8BI41 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynbQ8BI41 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynbQ8BI41 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SynbQ8BI41 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.21■□□□□ 0.19
SynbQ8BI41 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.21■□□□□ 0.19
SynbQ8BI41 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SynbQ8BI41 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
SynbQ8BI41 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.21■□□□□ 0.19
SynbQ8BI41 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynbQ8BI41 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SynbQ8BI41 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SynbQ8BI41 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
SynbQ8BI41 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SynbQ8BI41 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
SynbQ8BI41 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SynbQ8BI41 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Gm13474-201ENSMUST00000122466 815 ntBASIC16.2■□□□□ 0.18
SynbQ8BI41 Ank2-226ENSMUST00000189368 339 ntBASIC16.2■□□□□ 0.18
SynbQ8BI41 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SynbQ8BI41 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynbQ8BI41 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.19■□□□□ 0.18
SynbQ8BI41 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SynbQ8BI41 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.19■□□□□ 0.18
SynbQ8BI41 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SynbQ8BI41 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.19■□□□□ 0.18
SynbQ8BI41 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.19■□□□□ 0.18
SynbQ8BI41 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.19■□□□□ 0.18
SynbQ8BI41 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SynbQ8BI41 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SynbQ8BI41 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
SynbQ8BI41 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SynbQ8BI41 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynbQ8BI41 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SynbQ8BI41 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SynbQ8BI41 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms