Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab39aQ8BHD0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rab39aQ8BHD0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.74■□□□□ 0.11
Rab39aQ8BHD0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rab39aQ8BHD0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rab39aQ8BHD0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rab39aQ8BHD0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rab39aQ8BHD0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Rab39aQ8BHD0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.74■□□□□ 0.11
Rab39aQ8BHD0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rab39aQ8BHD0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.74■□□□□ 0.11
Rab39aQ8BHD0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rab39aQ8BHD0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Gm2399-201ENSMUST00000104944 225 ntBASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rab39aQ8BHD0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rab39aQ8BHD0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rab39aQ8BHD0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.71■□□□□ 0.1
Rab39aQ8BHD0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rab39aQ8BHD0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rab39aQ8BHD0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms