Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Krr1Q8BGA5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.11■□□□□ 0.17
Krr1Q8BGA5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Mir2861-201ENSMUST00000175539 82 ntBASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Mtag2-201ENSMUST00000058665 714 ntBASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Krr1Q8BGA5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Krr1Q8BGA5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Krr1Q8BGA5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Gm12896-201ENSMUST00000118430 226 ntBASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Krr1Q8BGA5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Krr1Q8BGA5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms